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    Home » Desserts

    Chocolate Chip Protein Cookies

    Published: Dec 2, 2024 · Modified: Mar 26, 2025 by Olivia Wyles · This post may contain affiliate links · 5 Comments

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    Chocolate Chip Protein Cookies Pin Image
    Chocolate Chip Protein Cookies Pin Image
    Chocolate Chip Protein Cookies Pin Image
    Chocolate Chip Protein Cookies Pin Image

    These are THE most perfect chocolate chip protein cookies. Super thick, extra chewy, and loaded with chocolate chips. They’re a delicious way to enjoy a treat while sneaking in extra protein.

    Chocolate Chip Protein Cookies
    TABLE OF CONTENTS tap to show
    1 Chocolate Chip Protein Cookies Recipe
    2 Chocolate Chip Protein Cookies Ingredients
    3 How To Make Chocolate Chip Protein Cookies
    4 Frequently Asked Questions About Chocolate Chip Protein Cookies
    5 Chocolate Chip Protein Cookies

    Chocolate Chip Protein Cookies Recipe

    When I set out to create these chocolate chip protein cookies, my goal was simple: pack as much protein as possible into a cookie that rivals the flavor and texture of Pinch of Yum’s soft chocolate chip cookies. I wanted a recipe that not only delivered grams of protein but also maintained the chewy texture and melty chocolate goodness we all love. After several tests (and a few flops), I found the perfect combination of ingredients and techniques to make these high protein cookies absolutely irresistible.

    The ingredients in this recipe are carefully selected to deliver the ultimate cookie experience. Instead of traditional white sugar, I used a mix of granulated and brown monk fruit sweeteners to keep things light while providing the right amount of sweetness. For the dry ingredients, I use my favorite keto meal mix: Keto Chow, which bakes up so well and adds tons of protein effortlessly. And the mixing process is just as important as the ingredient list.

    If you follow this protein cookie recipe exactly, you’ll end up with the most perfect high-protein cookies that are soft, chewy, loaded with melty chocolate chips, and just the right balance of sweetness. These cookies are proof that you can have a healthy dessert that also delivers on taste!

    Chocolate Chip Protein Cookies with bite taken out

    Chocolate Chip Protein Cookies Ingredients

    If you have a keto, low carb, or high protein lifestyle, chances are, your pantry is already stocked with most of these staple ingredients.

    Ingredients for Chocolate Chip Protein Cookies
    • Butter – Adds richness and moisture, creating that classic chewy cookie texture we all love. Using melted and cooled butter ensures the sweeteners dissolve better and the dough comes together smoothly. If you’re looking for a dairy-free option, you can use coconut oil or natural peanut butter. Both will slightly alter the flavor but still yield delicious cookies.
    • Monk Fruit Sweeteners (Granulated and Brown) – A mix of granulated and brown monk fruit sweeteners provides the perfect balance of sweetness and depth. The brown sweetener adds a touch of caramel-like flavor, similar to traditional brown sugar. If monk fruit isn’t your thing, you can use coconut sugar for a more natural option or stevia extract, though you’ll need to adjust the quantities. For non-keto versions, regular granulated and brown sugar work just as well.
    • Eggs – Eggs act as a binder and provide structure to the cookie dough. Room temperature eggs mix more evenly with the other ingredients, creating a smoother dough. For a vegan option, try a chia egg (1 tablespoon chia seeds + 2.5 tablespoons water) or flax egg.
    • Vanilla Extract – Enhances the natural flavors of the cookies and complements the protein powder’s taste. It’s a small but essential addition for that classic cookie flavor. If you don’t have vanilla extract, almond extract or a splash of maple syrup can add a different but equally delightful flavor.
    • Vanilla Protein Powder – The star ingredient here, protein powder, not only adds grams of protein but also helps create a denser, chewy cookie. Vanilla protein powder is neutral enough to let the chocolate chips shine. I bake a lot with Keto Chow which not only adds protein, but tons of other great vitamins and minerals. Feel free to use your favorite protein powder of choice. You can also use chocolate protein powder for a double chocolate version or vegan protein powder for a plant-based option. Whey protein isolate, whey protein concentrate, or even pea protein all work well, but the texture may vary slightly depending on the type.
    • Baking Powder – This leavening agent ensures the cookies rise slightly and don’t turn out too dense. If you’re out of baking powder, mix ¼ teaspoon baking soda with ½ teaspoon cream of tartar for a quick substitute. Make sure it’s less than 6 months old.
    • Sugar-Free Chocolate Chips – These bring the melty, gooey chocolate pockets we all love. I used dark chocolate chips from ChocZero for their rich flavor and low sugar content. You can swap these for unsweetened chocolate chunks, regular dark chocolate chips, or any chocolate you have on hand.
    • Optional Add-Ins – For extra flavor or texture, you can fold in chopped nuts, shredded coconut, or even quick oats to make the cookies more filling. Almond butter or seed butter can also be swirled into the dough for a nuttier taste.

    A Note on Flour

    This recipe doesn’t call for traditional wheat flour but instead relies on the protein powder and sweeteners to act as a binder. However, if you’d like to experiment:

    • Almond flour can be added for a slightly nutty texture.
    • Coconut flour is another low-carb option, but use sparingly since it absorbs a lot of moisture.
    • Oat flour or even cassava flour can work in small amounts for a softer texture, especially if you’re making a non-keto version.

    How To Make Chocolate Chip Protein Cookies

    Steps: Melt → Cream → Beat → Mix → Fold → Chill → Scoop → Flatten → Bake → Cool

    how to make Chocolate Chip Protein Cookies

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    1. Melt butter in the microwave for about 30 seconds. Allow to cool slightly. Cream together butter and sweeteners for about 2 minutes with a hand-held electric mixer until creamy.
    2. Beat in the eggs and vanilla extract for about 10 seconds on low.
    3. Add dry ingredients: protein powder & baking powder. Mix until just combined in a sticky dough.
    4. Fold in the chocolate chips.

    For the best cookie, chill the dough for at least 3 hours to overnight in the refrigerator. Then, sit it out on the counter for about 10 minutes to allow it to soften up and make it easier to work with.

    scooping dough for Chocolate Chip Protein Cookies

    Use a cookie scoop to scoop up 2 tablespoons of dough per cookie.

    Chocolate Chip Protein Cookies ready for oven

    Place on parchment-lined baking tray. Flatten slightly while adding more chocolate chips on top.

    Chocolate Chip Protein Cookies fresh from oven

    Bake for 13-15 minutes at 350 degrees F until the edges are golden brown. Allow to cool completely before devouring whole!

    Frequently Asked Questions About Chocolate Chip Protein Cookies

    Chocolate Chip Protein Cookies with bite taken out side view
    1. Can I use a different protein powder in this recipe? Yes, absolutely! I bake a lot with Keto Chow because it has the perfect macros, best flavor, and bakes perfectly. And while vanilla protein powder works great for a neutral base, you can use chocolate protein powder for a richer flavor or vegan protein powder for a plant-based option. Just note that different protein powders can affect the texture slightly, so you may need to adjust the wet or dry ingredients accordingly.
    2. Do I really need to chill the dough? Chilling the dough is highly recommended! It helps the ingredients meld together, prevents the cookies from spreading too much, and gives you a chewier texture. If you’re in a hurry, you don’t have to chill it.
    3. Can I make smaller or larger cookies? Yes, you can! For smaller cookies, use a smaller cookie scoop or a tablespoon to portion out the dough. Reduce the baking time to 10-12 minutes to ensure they don’t overbake. For larger cookies, just increase to 3 or 4 tablespoons and bake a little longer.
    4. What if I don’t have monk fruit sweetener? If you are not following a low carb diet, you can substitute with coconut sugar, brown sugar, or even a mix of stevia extract and erythritol. The key is to maintain the balance between granulated and brown sweeteners for the best flavor and texture.
    5. Can I make this recipe dairy-free? Yes! Replace the butter with coconut oil or natural peanut butter, and use a dairy-free protein powder. Also, be sure to use dairy-free chocolate chips like those from Enjoy Life or Hu Kitchen.
    6. What’s the best way to store these cookies? Store the cookies in an airtight container at room temperature for up to 4 days or in the refrigerator for up to a week. They also freeze beautifully—just let them thaw for a few minutes at room temperature before enjoying.
    7. Can I use this recipe to make protein bars instead? While this recipe is designed for cookies, you can press the dough into a lined baking dish and bake it to make chewy protein bars. Slice them into bars once cooled for an on-the-go snack.
    8. How do I ensure my cookies are chewy and not dry? The key is not overmixing the dough, especially after adding the wet ingredients. Also, be careful not to overbake; the cookies should look slightly underdone when you take them out of the oven—they’ll firm up as they cool.
    9. What’s the serving size and nutritional info? This recipe makes about 16 cookies if you use a 2-tablespoon scoop. The exact grams of protein and net carbs will depend on the type of protein powder and sweeteners you use. For the most accurate numbers, calculate based on your specific ingredients using a carb counter app like Cronometer.
    10. Can I add other flavors or mix-ins? Of course! You can fold in chopped nuts, unsweetened shredded coconut, or a drizzle of natural peanut butter for extra flavor. If you’re feeling adventurous, try mixing in some cocoa powder or swapping the vanilla extract for almond or maple extract.

    I hope you enjoy these super PERFECT chocolate chip protein cookies!

    If you enjoyed this recipe, check out these others:

    • Easy 3 Ingredient Sugar Cookies (Made With Coconut Flour)
    • 3 Ingredient Pumpkin Cookies With No Eggs
    • Keto Gingerbread Cheesecake Cookies
    • Keto Chocolate Sunflower Spread Stuffed Cookie Bars

    PIN FOR LATER!

    Chocolate Chip Protein Cookies Pin Image
    Chocolate Chip Protein Cookies

    Chocolate Chip Protein Cookies

    These are THE most perfect chocolate chip protein cookies. Super thick, extra chewy, and loaded with chocolate chips. They’re a delicious way to enjoy a treat while sneaking in extra protein.
    5 from 2 votes
    Print Pin Rate
    Course: Dessert
    Cuisine: American
    Keyword: Chocolate Chip Protein Cookies
    Prep Time: 10 minutes minutes
    Cook Time: 15 minutes minutes
    Total Time: 25 minutes minutes
    Servings: 16 cookies
    Calories: 134.38kcal
    Author: Olivia Wyles

    Ingredients

    • ½ cup butter , melted & cooled
    • ¼ cup granulated monk fruit sweetener Note 1
    • ¼ cup brown monk fruit sweetener
    • 2 eggs , room temperature
    • 2 teaspoon vanilla extract
    • 2 servings Vanilla Keto Chow (or protein powder of choice) Note 2
    • 1 teaspoon baking powder Note 3
    • 9 oz sugar-free chocolate chips Note 4

    Instructions

    • Preheat oven to 350 °F.
    • Melt butter in microwave about 30 seconds.
    • Beat melted butter and sweeteners together on high about 2 minutes until creamy.
    • Beat in eggs and vanilla extract on low about 10 seconds until just combined. (Note 5)
    • Mix in Keto Chow and baking powder until dough forms. (Note 6)
    • Fold in sugar-free chocolate chips.
    • Chill at least 3 hours (or overnight) in refrigerator.
    • Sit out dough for 10 minutes at room temperature. (Note 7)
    • Scoop out dough (about 2 TB each) with cookie scoop or tablespoon. (Note 8)
    • Flatten slightly and add extra chocolate chips on top. (Note 9)
    • Bake on parchment lined baking tray for 13-15 minutes at 350 degrees F until golden brown on edges. (Note 10)
    • Cool about 30 minutes on baking tray, then transfer to cooling rack to cool down completely before serving. (Note 11)

    Video

    Notes

    1. Sweeteners – Feel free to use whatever fits in your lifestyle to sweeten this recipe. I found the best cookies have some type of granulated plus a brown sweetener. I used Lakanto’s Monk fruit sweeteners for this recipe.
    2. Protein Powder – I bake a lot with Keto Chow because it has the right macros, tastes great, and bakes amazingly well. It’s a keto meal mix, but feel free to use whatever protein powder you prefer. The nutrition facts will be drastically different so be sure to do your own calculations. 1 serving = 1 scoop = 1 packet = about ½ cup
    3. Baking Powder – I use a gluten-free baking powder from Rumford brand. Make sure your baking powder is less than 6 months old as this can alter any baking recipe dramatically. 
    4. Sugar-free Chocolate Chips – I used ChocZero chocolate chips for this recipe, but Lily’s and Lakanto make great sugar-free chocolate chips as well. Or, if you don’t care about added carbs, use whatever chocolate chips you have on hand.
    5. Mixing Eggs– Careful not to overmix especially on the egg step. You should only need a few seconds on low with the mixer to bring it together.
    6. Mixing Dry Ingredients – The same goes when adding the dry ingredients. The dough will look slightly sticky when you start folding in the chocolate chips. 
    7. Chilling & Sitting Out – The chill step is optional, but it makes for a better cookie. After chilling for at least 3 hours in the refrigerator (overnight is best though!), take it out and sit it on the counter for about 10 minutes to soften it up and make it easier to scoop out.
    8. Scooping – Use a cookie scoop for best results, but just make sure you have about 2 tablespoons of dough per cookie.
    9. Flattening – This is not optional. Since this is a gluten-free cookie, it will not spread properly so we have to flatten it a bit before baking to be sure it bakes thoroughly. Adding extra chocolate chips on top is purely for aesthetics and totally optional. 
    10. Baking – I made these in small batches (6, 6, and 4 to ensure they didn’t bump into each other) Keep an eye on your cookies around the 12 minute mark. The edges will be golden brown-ish, but they will still look slightly underdone when you take it out of the oven. That is okay! We want them to look that way and be super chewy when it’s done cooling. Don’t over bake or you will be super sad.
    11. Cooling – Please, please, please don’t skip this step! Once you take it out the oven, resist the temptation to dive in head first. Let it sit on the baking tray for about 30 minutes, then transfer to a wire cooling rack until completely cooled, then you may serve them. I know, it’s tough!
    13. Storing – Store in an airtight container at room temperature on the counter for 3-4 days, or in the fridge for 7 days. I like using glass containers for maximum freshness. These also freeze well. 
    14.  Nutrition and carbs – Be aware that some recipe blogs omit sugar alcohols or allulose from the nutrition calculation since it does not affect blood sugar. For transparency, I have included it and calculated the net carbs below. Always use a carb counter app like Cronometer according to the brands you use in order to get accurate nutrition information.
    15.86 Total Carbs  – 9.42 Sugar Alcohols – 6.07 Fiber = 0.38 Net Carbs per 2 TB cookie or 1/16 recipe.

    Nutrition

    Serving: 41g Calories: 134.38kcal (7%) Carbohydrates: 15.86g (5%) Protein: 5.2g (10%) Fat: 11.28g (17%) Saturated Fat: 6.59g (41%) Polyunsaturated Fat: 0.09g Monounsaturated Fat: 0.25g Trans Fat: 0g Cholesterol: 39.81mg (13%) Sodium: 142.58mg (6%) Potassium: 303.77mg (9%) Fiber: 6.07g (25%) Sugar: 0.23g Vitamin A: 79.92IU (2%) Vitamin C: 15.4mg (19%) Calcium: 109.55mg (11%) Iron: 1.63mg (9%) Net Carbohydrates: 0.38g Sugar Alcohols: 9.42g
    Did you make this recipe?I love hearing how my recipes turned out for you! Add your "try" on Pinterest and mention @oliviawylespins.

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    Reader Interactions

    Comments

    1. Sonya

      March 23, 2025 at 6:35 pm

      5 stars
      I tried this with the butterscotch keto chow and it was amazing. Have you tried it with chocolate peanut butter or cake donut flavor?

      Reply
      • Olivia Wyles

        March 23, 2025 at 8:42 pm

        No, I haven’t but I bet this would be amazing!!

        Reply
    2. Deborah

      December 04, 2024 at 4:06 pm

      Is it possible to use Vital Protein collagen powder in place of the protein powder? Thanks!

      Reply
      • Olivia Wyles

        December 05, 2024 at 7:15 am

        Sure, it’s okay to use your preferred protein powder.

        Reply
    3. Olivia Wyles

      December 02, 2024 at 3:54 pm

      5 stars
      After several attempts at creating THE most perfect protein cookie, these are the absolute best. So chewy and full of chocolate chips!

      Reply
    5 from 2 votes

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    Hi, I’m Olivia, and I’ve been creating easy recipes made for real life since 2018, all with minimal ingredients and convenience in mind. My recipes are quick and easy—just grab a few ingredients and you’re good to go! I focus on keto, high protein, low carb, + carnivore recipes. Learn more about me here.

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